It gives them a three point cushion on Carlisle United with just five games now left to play.
The latest supercomputer is predicting that every point will be crucial with just one point set to split third and fourth places.
Here’s how the supercomputer thinks it will look at the end of the season.
Give us your predictions on how the season will finish via our social media channels.
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Northampton Town have a three point cushion on Carlisle United following victory over Gillingham. Photo: Pete Norton
. Leyton Orient - 89pts (+28)
Win the league: 95%
Promotion chances: 99%
Play-off chances: less than 1% Photo: Pete Norton:
. Northampton Town - 80pts (+17)
Win the league: 1%
Promotion chances: 59%
Play-off chances: 48% Photo: Pete Norton
. Stockport County - 79pts (+27)
Win the league: 1%
Promotion chances: 61%
Play-off chances: 53% Photo: Naomi Baker
. Stevenage - 79pts (+18)
Win the league: 1%
Promotion chances: 53%
Play-off chances: 50% Photo: Pete Norton
. Carlisle United - 77pts (+23)
Promotion chances: 39%
Play-off chances: 64% Photo: Stu Forster
. Bradford City - 77pts (+18)
Promotion chances: 39%
Play-off chances: 64% Photo: Chris Holloway
. Salford City - 75pts (+19)
Promotion chances: 23%
Play-off chances: 61% Photo: Pete Norton
. Mansfield Town - 75pts (+17)
Promotion chances 25%
Play-off chances: 57% Photo: Chris Holloway
1. Leyton Orient - 89pts (+28)
Win the league: 95%
Promotion chances: 99%
Play-off chances: less than 1% Photo: Pete Norton:
2. Northampton Town - 80pts (+17)
Win the league: 1%
Promotion chances: 59%
Play-off chances: 48% Photo: Pete Norton
3. Stockport County - 79pts (+27)
Win the league: 1%
Promotion chances: 61%
Play-off chances: 53% Photo: Naomi Baker
4. Stevenage - 79pts (+18)
Win the league: 1%
Promotion chances: 53%
Play-off chances: 50% Photo: Pete Norton